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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE24999
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAENFYNVN NFQSLPLEIK VQFSKETLFS ALQQEAETQR YDGWYNNLAN SEWGSAGSRL  60
   61 HRDARSYYSD GVYSVNNSLP SARELSDILF KGESGIPNTR GCTTLLAFFS QVVAYEIMQS 120
  121 NGVSCPLETL KIQVPLCDNV FDNECEGKTT IPFYRAKYDK ATGNGLNSPR EQINERTSWI 180
  181 DGSFIYGTTQ PWVSALRSFK QGRLAEGVPG YPPLNNPHIP LNNPAPPQVH RLMSPDRLFM 240
  241 LGDSRVNENP GLLSFGLILF RWHNYNANQI YREHPDWTDE QIFQAARRLV IASMQKIIAY 300
  301 DFVPGLLGED VRLSNYTKYM PHVPPGISHA FGAAAFRFPH SIVPPAMLLR KRGNKCEFRT 360
  361 EVGGYPALRL CQNWWNAQDI VKEYSVDEII LGMASQIAER DDNIVVEDLR DYIFGPMHFS 420
  421 RLDVVASSIM RGRDNGVPPY NELRRTFGLA PKTWETMNED FYKKHTAKVE KLKELYGGNI 480
  481 LYLDAYVGGM LEGGENGPGE MFKEIIKDQF TRIRDGDRFW FENKLNRLFT DEEVQMIHSI 540
  541 TLRDIIKATT DIDETMLQKD VFFFKEGDPC PQPFQVNTIG LEPCAPLIQS TYWDDNDTTY 600
  601 IYTLIGLACI PLICYSIGHY MVERRIRIGH NSACDSLTTD FSTESPKVNV YKVNALEWLQ 660
  661 EEYIRQVRIE IENTTLTVKK PRGGILRKIR FETGQKIEVF HSIPNPSAMH GPFVLLSQKN 720
  721 NHHLVIRLSS DRDLSKFLDQ IRQAASGINA EVIIKDEENS ILLSQAITKE RRQDRLDLFF 780
  781 REAYAKAFND SELQDSETSF DSSNDDILNE TISREELASA MGMKANNEFV KRMFAMTAKH 840
  841 NEDSLSFNEF LTVLREFVNA PQKQKLQTLF KMCDLEGKNK VLRKDLAELV KSLNQTAGVH 900
  901 ITESVQLRLF NDVLHKSGVS DDAEYLTCNN FDALFSEISD VQPIGLPFNR KNYNSHIKEP 960
  961 SCHTSFPIVD HSTPAPLSLI QRICAFLETY RQHVFIIFCF VAINIVLFFE LFWHSRYLNE1020
 1021 DRDLRRVMGA GIAITLSSAG ALSFCMALIL LTVCRNIITL LRETVIAQYI PFDSAIAFHK1080
 1081 IVALFTLFWS TLHTIGHCVN FYHVGTQSDR GLACLFQETF FGSDVVPTLS YWFYGTITGL1140
 1141 TGIGLVIVMS IIYVFALPKF TRRAYHAFRL THLLNIGFYA LTILHGLPSL FGSPKFGYYV1200
 1201 VGPIVLFVID RIIGLMQYYK SLDIAHAEIL PSDIIYIEYR RPREFEYKSG QWITVSSPSI1260
 1261 SCTFNESHAF SIASSPQDEN MKLYIKAVGP WTWKLRSELI RSLNTGSPFP LIHMKGPYGD1320
 1321 GNQEWMNYEV AIMVGAGIGV TPYASTLVDL VQKTSSDSFH RVRCRKVYFL WVCSSHKNFE1380
 1381 WFVDMLKNVE NQAKPGILET HIFVTQMFHK FDLRTTMLYI CEKHFRATNS GISMFTGLHA1440
 1441 KNHFGRPNFK AFFQFIQSEH KEQSEIGVFS CGPVNLNESI AEGCADANRQ RDAPSFAHRF1500
 1501 ETF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle