YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24973
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPEASSSG NTEDLRIEDL FHQKRNEDTI AKIFSIIYAP VGLIILLIRV FLGFHTFIVA  60
   61 CLLRKSAALR MHTLRIMCSI LGIVVEKSGH RDESARVLCA NHVSILDHLA VDILTPCLLP 120
  121 SVWDIPSIIR WCFGYVDLGA TRGRDQLVSR AKQLLTREQM PLLAFPEGII TSGEKALIKF 180
  181 NTWCFEVSSV VQPVSVRVWR PYPWKVSVSV LGSSWWTDLF YFFALPFTVI TVEYLPKMER 240
  241 RENESLEEFT ARVAETLAGN LKIAVSKFGI SDATEAAKRL RTDRERAKKV VVREKTSPRL 300
  301 ADPRQMDECA MRIKQSFPSF HLSAIRRDLE KTRSQTTTVN NLKAGKISSS ASDGQTGKVT 360
  361 LDAGTWRGVF DNRKWQMIEV NRQKYMNRDS

Type	Start	End	Confidence
Cytoplasmic	1	33	0.51
Transmembrane Helix	34	59	0.76
Non-Cytoplasmic	60	390	0.53