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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE24945
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIVPYLVAL VLLILSPPPA TSSTANISSL IEALGPNKLC SVYDPFKVLP ENNKFQIGGS  60
   61 FPLHQDDCTT LRPDTVQEIV AIQWALTHWN QKDENGDCKL GLYAGDTCSR SAESLSQSLR 120
  121 FLDSVGYHEP KECRTETPGA KLLGLIAPKD YESSMSLGKF LSVSAIPVAA YSSESVNALT 180
  181 ELDVENTIAT SPTIGVYVEA LIRLINQMRS NLVTVVDDGA QNPVVKKVIS YLRDADIFVS 240
  241 ESIPIDHPFL AQALEDSDSS IVVSVLNKQQ LLKTVKHPSI YAMSKMWISI PTEGEALDES 300
  301 EQLELLHKDA KLEVVSLQPK YKELPQFRDY FIRVLRNNFK NYQLLTSYIE QVYNCTNEDC 360
  361 NLNKDVMMKT YVQARTAEAS IRMTYAFAAV AQIIGANKEY EKTCSHASSE CTELIMETLE 420
  421 TMDYAFNKQD PPEFAGERLQ FYRGTENILL ASGMQVEAIE IYNQDKEPVT SRLLSFTTGN 480
  481 PPTVIMSSLR SADQRLRSIC APYRPFCGQC PNLQIVNSDH HFLSIPRHYP LYLVGLFDLH 540
  541 SGQTCQSMAH TDISLPMAFV HTVWTFKQRF PQLGLLKDLD FGALLIDSCS SGKQAIESVV 600
  601 RSETQCFRFN QAGRNITIVP KSVFGYASAL HGDSQESLKG YFSSGDTDAS LVSVDSEHSA 660
  661 LQRSFTALPS SRNQALALLK LLNRMQWQFV TAALSEQDPE SLSLFRAFER LALDRGVCLA 720
  721 EVLNIGGSRL DNIRSTTNVT IVFSTARDAA DYLIASKIRG NHVNVMMGEA HDWYLHAPNN 780
  781 KELFPGTVSV QPRNILYGDF REWLETTTPL TLPELWYWSY IESRYGCALS QKSKVIYGKM 840
  841 CTGDELLNIE SLGRMTKAGY LSRGVERFLF AMDSVYKSLC PAQNGLCLEF YEQGRRQILT 900
  901 QLKKTSTEDD VEIYEFLPDI NNHFTYHLIA NWTLTTGLRM TNQYRNGNGV PTESKCQPPM 960
  961 CKCFLDGDFF QRPLDSFVFR PDEPEGSDQS SYIKRQPAFG SEKIEYQSVF EHITTGHWRD1020
 1021 HPHNYVLLAL ITVLVVVAIA VLVLVLVKLY LRVVKGNQSL GISLLIGIII LYSTAFFFVF1080
 1081 DPTDSVCRLR VILHGLGYTI CFGVMIAKAT QLRNAETLGF GTAIHISFWN YWLLLFFIVG1140
 1141 VQIALSISWF LEPFMSTIGV IDTNVQRMMC TMGKVEFVVS NFYVMILIFM ALFISMLNRN1200
 1201 IKRNYKETKW LLYSTVLCFF TWVAWITLYL VLDHEFRDTV IVVELVACAT ILLGFLFGPK1260
 1261 IYILLSYEPV VVAFKRDPFP NHTDLFEKDD DLPSQRAVSP ASSTSSSSNR SSSGSSYTSS1320
 1321 SKRPVNAVGP LPLNKNVEDQ SPIFHTVMRK KTKVRRSNSE HDTIMNVGIP MTSVPIIRSP1380
 1381 SARDEKVHRV AISPPIRDYN SINH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle