YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24890
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRIVLARSS RAMSSASPAS ASDSDTSVRK IGKALETYLK HSQQHVAMME KHRAEFETGR  60
   61 RHLAKMMSLD IHELDQEAID RAILYLFPSG LTDPNARPVM RPPDEILPKF QRFTFDEEGK 120
  121 PEGSRFFTLS PKIYGLLSDI GVKTHSVMKF YDEHVGSRSV NRSDLEPANL SGSQWVTADK 180
  181 LKKKLSEKFS KELYGQVIIA FEHLASLPGS AIEQKFLMEF REPMTASTGS KLFGPAIPEV 240
  241 HVCAVTNRRY AEVTTRCKDT RATVKVTDAG KGKFDIDGLQ LHDFRHLQAR EILLAPMIVS 300
  301 QSLGRFDVTA TTSCISNTLP EAPNKAPLMR SGGMSALPRA VRHGTALCVA ALQPEAIEPL 360
  361 RLSGLLTLDP RKNERSKVNQ PGARAKWIWK RR

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	392	0.99