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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE24793
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLLYLLILK PFLSSSIDLL PASVPNVCPF RPTSCNLLCP FGYLKDILQQ CICTCAMDPC  60
   61 QTTICGPSES CIAIGVKARC IPKFGSNREE CPRLTGGICA LRCEKDSDCS GRLICCSNGC 120
  121 GRECVAPIAK SFQIDREVPI QPVSSSSNNI PGSFQRLIKA VSNIGSTHFN ITPIPPTIRN 180
  181 LANSLFPTPS PIRPLPTTKV GQCPSPTSNK SICIDQKQCA NDLDCGSVDK CCQNACGSTC 240
  241 MEPLKATGCI HMVLAISKLK DKRLPNEFVP FCERNGRFSS IQCDIQFCWC VDVHYGSEIA 300
  301 GTRISREQRR IDMCREPRLC TKKCHNQCTH GHVMDIFGCP IASCSCVDIC RNVNCENTWE 360
  361 QCQLVEPDCA NPPCLPVPRC LLNPCRHGPP SRLGNGITAL CSIDKDCPEG TCSKIGYNGL 420
  421 GFCCSGPASS TRDGRCPSQA ADKLKCLIYP DNSCHSDHEC SEDEKCCFNG CTLSCTQPED 480
  481 YVLKKPLKPI EPVMHYQPGD VEKYNKGHLS SLVADCIDII ASNVSCATEC HSDSQCAGMK 540
  541 RCCRQGCSTS CMYPVRSTPC FHLALTAELY SLRNAMKCDR AGNFEQYQCD DEGCFCVDIA 600
  601 TGEELPGSRA IGRKPNCESR NPCEPLVCKV ACPFGFERGS NSCPTCKCKN PCKEVKCPQG 660
  661 SVCVMSSIQC YQKGNCVPQP RCVLNFCPAG EPYISSIGNA ESCTKDEECP TSTHWCHKLG 720
  721 LASGGMCCLS PPLVRHAGSC PIVPISLDAK MCRVSCKVDD DCSGHQKCCF DGCGAGCRDI 780
  781 ATPLIEISKE IFEKAGTCIS EQRVLCNRLE KNTCEYDTDC AGVAKCCDDG CVKACAYPLQ 840
  841 TSKCLVRKTN LQKMGQMDLI KCRPDGSFEQ IQCDTEFCWC VDEEGNYVEG TRTGEDITPN 900
  901 CPEPCEKLEC GTIGCEYGHK KDKRGCATCD CVDPCEGVTC GIDSLCVPTT VPCVTKPCPT 960
  961 IPRCIINPCP ISEAVKNETS LHLKKCYRSN DCFDAIMTTH CSMVTQEFGF CCTAESPETH1020
 1021 VGTCPKITDL NTAKVEKCIQ ECKTDSDCGQ TSKCCWNGCG LTCVTSSISR IVPTPSIQQT1080
 1081 MPGTHFGECL NVAPLGAFCL QRPTIADCKN DDDCPSLYKC CSDGCVMRCT QPHRAPLCIH1140
 1141 QRIAALTIAK SEGVESNEKD SGVFIPDCDL NGNFDEVQSH FGLMWCVGRS GQEIAGTKST1200
 1201 RVPNCDDPRP CPTRFCAEQC PYGFNSDNEG CPICDCRSPC EFLNCPAGNV CRMIPVKCTT1260
 1261 PECRPVAKCI PNMCGTGEPL ALENHLLATC SPISSCPAGY HCKNSGYGDI SFCCSTPEVA1320
 1321 QQSLRCPVIP IMLASVDGSS CVVGCRHHYD CTHSSCCYNG CGTSCQFETR QLAIKPIKTL1380
 1381 KPFKPSKPSK TTRRPILSSL KIEKKASKIE NVIVEHHAVL PVSPAPGKLG TCPKLLINPG1440
 1441 CTEQCSQDSD CHGFLKCCQA SCGTMCSAPR IATACIHRLI AFESNIASEI VNLIIPPVQC1500
 1501 TPEGLFRKYQ CDARLNQCWC VDKATGVEEI GTRLFTIGLQ SPDCNLPKSC PTQCIGSRCP1560
 1561 YGIRTDGSGC PANGVCECIN ICSTFNCPQN MECALRRVEC TSNPCPDVPF CVEVQCPIPQ1620
 1621 RDLYRNVILC ENDGGCGKNS KCVLNPKTEM GICCHQKHTQ SSVLNLISPA IVAAAPEVIE1680
 1681 ATTIVDRGNS PVVVEAVPMS LSTNCTTMRI ALEYLHQNGA VLKSPLPVCS RNGNYDQTQC1740
 1741 DNKRCWCVDE LSGEEIHGTR KKKTKNACKS QSMCLSKCST SLCPYGLVLD SIGCPRSECI1800
 1801 CKSACEHVEC PNAQVCILRK ADCPNKWCLP VPTCEKSPCN SGLRPLIETR TRQQYSCTQS1860
 1861 TVCPVGYYCT AFDDNMHGVC CPGANSIKSI GEHNGLTCPH GDPFSSLADG TPFSCTVLTN1920
 1921 GCPATHYCST MPGQKKGICC VSKRYVCNLQ RDAGPCTATV TRFFYSSLTH SCTPFDYGGC1980
 1981 SGNLNNFATR DDCNNFCAGI GLDLSSPYDH ASAPVPTESY QIAFTLSGGK IKSTKMQDAE2040
 2041 IQLINTLVER FKIPRGSIED VILRDDNTVK FTIRDVDARR FAREVSEKVS TGEWTMTLSG2100
 2101 QKLTAEPHTL TASHVSNEHG RKNTAQVILY AILLAASIFL LCVICLIGFS CFCYYRNHPK2160
 2161 DRAHTPTNTT TITEPRSRQT GLRRVFSRDE ISECSDFNRP PMHDVSMLNR DRGHPRSQSW2220
 2221 LSIG

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