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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE24739
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHTHIAPGM PRRVRLIDWI LLVVIFITIY TILHNESDNE IETSDVQLEK PIWKKEDIRE  60
   61 MCQFLEHEVT GEEGDQWVKG NDYEKKLRLR GITVVFRHGE RSPVSKVEDD IGCLASRDVD 120
  121 RKAFVAYKEL AESDEIKAFL KLDPQLKQYP RVPLVSKCVS GMLTAEGALQ HLRLGKYFRH 180
  181 RYEKTKLFAD ENQRIVADVV SSKYNRTVQS ALAFSTEFLY KQRTFLAPIQ IKASNFSYHC 240
  241 IDQSCACQIH KSIRRIYEEE HLQQFNEMKS DDVADEEKKF LSFPQFAASF DPFQMIDVGL 300
  301 GSFICRRKTL PCRLKECVTL DSFNKMINLT TSRGSRMFDD KIGVARRLQS MEAYPILSYL 360
  361 RDSVNKIRKF PHSNYIQIFS GHDVTVGPIL RVLGIPFVDP PHYTSRIVFE IYEHSDDGLF 420
  421 IRTLYNGRNK TYNIRFCQDT RGHKNHRFFG FPKMNWATKA RNVLVPRIWF TKNSGEDDDV 480
  481 TKKNQVIVRS MNADQQSDEG CWPELKEFCK AHVIECSVFG LFILFGFFCI FNAFGFLGPN 540
  541 ELTLRNSYYE KMVIEHCQFV ENRDLQGSEG RTDHPNATLI SILAAVRHGD RFGLYTGGKC 600
  601 SELSEQEAKE FEEYLTVSRG QNITSRLNIP PGFENLQIVP GGNKCQRAFL SPRGAIQEFA 660
  661 LGRFLYSLYK DTPLFDTSET PLNLKLTFSK FQRTFASGIA LVSGLLDQNQ TNFATPIQLT 720
  721 NSSVYYGCTD AECNCDNVIK TLLQTMKAES QGLFQLEADR RILDVAKKMF DAINYSSVHI 780
  781 DPLDVIDNLV AGYVCQRKEL PCNDQFCTSF MYFGDVLEYF NKQSAKMFNL NLGVDRQYRV 840
  841 LNSYPILRAL GLMAEGNEKE VQLFSSHDTI IGSILRIITD SAIYNDWQLL AARVVFEVYE 900
  901 TPSKTRLLRV LHNGVDITST VKFCKSFEYG LCPLSGLQEF LKIGIFEVAG FKSFEEETCK 960
  961 DHRTELILL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle