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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE24677
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.55
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSKQISKI VGRSKRSEMN TFQSFAIVLL LMFCKLHAFN STTLDPPDTT DSVKESTKPT  60
   61 DYLEHITIIA HIANGITLQA GLMNGSIPIN EVVGEMLNLG SANVSDLINY KPDKILELIK 120
  121 KLKEVRQSAA ANNEISPMEK RALEWEDYRL RSEFIGDVTN LTGSVEYFNA VGNFQRDFNS 180
  181 SLFESTAEKF DGFNEHITSI LKSSLKDTSF PITGSAKLKV FNETFQSLKV LLTEIKTLNR 240
  241 TSFDILHNGP NIFKSLDTVI KLSALRQNYI ALYSKKVEDA IKTNIELVSA LSAVNEASRS 300
  301 DMMTVSKLSD RLVSIPSRKY TSGFSLELIG LEQLTDDVKN QWFFEMTNAT EVDGQSIRKS 360
  361 LKPIFSAFET LQAVNKKLKV TFPERTKFQQ FKDEPYFIPV NANSYIDVVK KYEGCNENGH 420
  421 SDDYRKKGVE FMNNVETVSD WLTAFDNFTQ TLDLDQLEKD VAAFVESLNF TDINNETQSR 480
  481 MEVIEIVKNI RSNNISLIKI QESVKGIETQ FNAVRLDSLR NSVFPKVTDE FKKDEDFQKV 540
  541 INAENNVNSC LQNVKNESLV ISEAIKTIQK LRVLDDNLLE SVRQTATSVA QFSTVLPTVG 600
  601 SIPDAMKKGV KNVTLQLNEM SLKSLNQSDG IGISASALRN VFSLLDLESS INQLKSVDGI 660
  661 VKVGIDKSSN KSELQSLWGS HNDDIISLEG AIAKSKVFKS KIDVSKAKTL SSYSTPLQNL 720
  721 ASIPDVKIDA VKKSKALEIL ISSLVASSVK RRKKRDTKSD LLAAKATLDK IAVLDLQFSS 780
  781 HSTQFQNVPS AFQSFDNFLQ LFFASQQPIS VPPPNPQSNS GGVNTGGTGN GTSSGGPSGN 840
  841 TGTGPTVGVT AAVVGSSTVS TVSDELSVVI PVVLILVALV IGGIVFIWYR KREEKRKEEE 900
  901 AEEERKREEE KLIAERKRIE EVEEQRKREA EDKEKIEQLN AKVREKEERS EARRKQKEKD 960
  961 DEEEKRLYEE KEKEQRKKQI KGIEKWTKSM DFKDNHKTAK FYNTTIENVN VTTIDKDHIT1020
 1021 ESYAYLPKNK HRYPTLPCKP STAVKVIVNG QRVPIHANWV PTPGHPHRFI VTQGPLKNTR1080
 1081 YDFWMMLTQY DVEHIVMLGQ NMENLIVKCD YYIPPHISEP FKIGRFNIKI TDGKSILNKK1140
 1141 IYQRTLEVVD STGKLATRTV MHYQYAGWTA RGVPKSHAEM FDLMEMLKKS EKPIVVQCPN1200
 1201 GIGRSMAFIG TECLARQVEA DPTIELTEAL KHMREHRWNG IQKNFQLYWM TLGTMYRLIK1260
 1261 EYGFDMKIYD QQMAIFSDVV DRLVALDKNS VDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle