YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24656
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSTGFLVL LTALCHVDSL NVNTKLVLIW GSPNDTEISE TYSGSWDECL QKCYCDVTCV  60
   61 VIFRTSAGGE IYKIGTPFSV QKIIGAGGNI VGIKRTQEGC SGTFPRPMFG QTTVTESFTS 120
  121 EKIVYNYTIS EIENDDLTEW KFDFKYFVQC DEESFASIRG DIAVCISIRT FSGPFCQNRA 180
  181 AGVALCTEGN GLVITGAYAY AEGYTIGDYL TKKSNSALLP TRYSNMYFWI DGIRSSSAQY 240
  241 NMSDPTLNGI TCFNWGPNSQ EGVLNTCAFI EGTSIVRYWD CDATENGNSY CLRGAVCRIK 300
  301 PVSHT

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	305	0.99