YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24598
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVPKADSY LERQEHGSTL SEFIQSFEEQ YNISIQELID LAKTNAATTK KSTMSSEIQE  60
   61 KLDILKKQDD QLRDALDEEL KFLGNDDPQE LAGTNKEVTV DDALKSPEAS DDSESDASDE 120
  121 SESESESEDE SESEGFDESE DEEEVPKETG TYAFESKPEA LDDSESEASD VSESKDESES 180
  181 EGSDDSEDEE YVEETCTDAL NQLEPESDAA DESVEEEEEE DEDSDDSDDS DDSEEEEAEG 240
  241 STAQAPAEKA NSSTTTTDQN IGELSDMEVA GLVLLGILMI LLMVFF

Type	Start	End	Confidence
Non-Cytoplasmic	1	266	0.75
Transmembrane Helix	267	285	0.78
Cytoplasmic	286	286	0.58