YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24538
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQHQQQYYL FLATLIMIRV ALPTTASAIP RSISTSPGET ISKNHEEEVK RVWRKADAVC  60
   61 FDVDSTVCQD EGIDELAAYL GVGEAVANVT RTAMNGNARF RDALAARLQV MKPNHEQLEQ 120
  121 FVNISKPKLT VGIRELVSRL HARGTHVYLV SGGFRRLILP VAELLGIEKS RIYANEILFD 180
  181 KFGKYHGFDT SELTSDSGSK ELKSSITNLF GPTGKPAVIA LLKKMYNYKT VVMVGDGATD 240
  241 VEASPPADAF IGFGGNVIRE GVKARAKWYV TDFDVLRKDL DHDESDIDDE

Type	Start	End	Confidence
Signal Peptide	1	28	0.58
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	290	0.98