YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24533
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.91
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLIALLSL ATYADSLYFH IAETEKKCFI EEIPDETMVT GNYKVQLYDP NTKGYGDYPN  60
   61 IGMHVEVKDP EDKVILSKLY TAEGRFTFTS NTPGEHVICI YSNSTAWFNG AQLRVHLDIQ 120
  121 AGDHAQDYAQ IAQKDKLNEL QLRIRQLLDQ VDQITKEQNY QRYREERFRQ TSESTNSRVF 180
  181 YWSIAQVVVL AITGAWQMRH LRGFFEAKKL V

Type	Start	End	Confidence
Signal Peptide	1	14	0.99
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	178	0.99
Transmembrane Helix	179	198	0.88
Cytoplasmic	199	211	0.85