YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	faah-4
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNFWSTWS PSQRIFSLIW PATILYLIMK LLIEKMWGKN RGAVERFQTR REALFDDFKS  60
   61 RSAPASLVNN PRIVKGNETA EQIETTFNEI LKLDLIALKS ALQTDKYNAY TVLCAFVWRA 120
  121 IDVNSEINCI TEVIREAFNT AEALDDNYAQ TGEKGQLFGL PFSVKSNFYM ENYDVTVGLA 180
  181 KLLEQPKTTT CPMVQFLSDQ GAVPFCLTNV PQGLLSYVSS NPIYGTTKNP WDFSRTPGGS 240
  241 SGGEAALLAA GGAAFGIGSD LAGSLRIPAA FCGLVTLKPT QDRLCVTDTH GGLPGRGRLG 300
  301 LSFGFYTRSV KEQEFLLGLI VGRSEYLELC PMSSPAKLEK HIEKDQKLVI GWFVDDGFNP 360
  361 VVPSNRRAVE ETVKSLQAKG HQVVELKLAD VSEEFPPFAV ADMLFRNVMP DNGAYMSEMY 420
  421 AGEQYDEHMK LFIRLVCLKQ NFLVSFLLRY GVMPFAKLAL SKRLACIGSA YNSDLAACRQ 480
  481 NQENTDSYKL QWIRYWKSKK IDALICPSFI TPAQPFEYPA QLSNGAFITG LFNMLDVPAG 540
  541 VVPVSPVNQK DVDQLIDGFS TEGDLLLKKQ REAARGTTGL PNAVQVVTLP NCEEMCLRVM 600
  601 RLVEESAEGV QRLQWRVGAS AAPIDVENTP AGVVSSLEHF ERVNLLH

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.76
Transmembrane Helix	15	33	0.77
Cytoplasmic	34	242	0.65
Transmembrane Helix	243	258	0.46
Non-Cytoplasmic	259	647	0.83