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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPILLKLLL LLHVIFDISF TIISLGFYTP GWVFNLDDVF KTFHINDYNY MISPLDFVGL  60
   61 CLFRQVSLLV ALIIVRRGKA ERLKKYMTIY DLFGILGYMI AVVKLLVFDE TSGFLKSPGV 120
  121 FMSVGSAVFL TFSLPFAIRK TLLGKKKEGA EYERLTENTE TAANTNVENG TASTNGTAST 180
  181 ATPTAATSST SRSSSTDEED NDAVSKEEKE KRLPLLTHLW QIVKLCSVQW KWFSAAYVLL 240
  241 FVDCILNLIE PALYSQMMST AIRMKSFDVL KRACIVLAAV QFTEATVNTV RYICMQYAER 300
  301 LTARNIRVSL FRAILHQDIS FFDDNKTGQL MSRITKDSES ISNSLPVYIE TTVNNSFMLF 360
  361 GSAPIMFYYS WQLAISTFVT FPIILLTTKF YGLIVEKLSE KENDATAVSN ETVEEVLSAI 420
  421 RTVRSFAAEK IENMRYTRDT DAWFKISTKT VVFGTFFNYF WATMWNIEDV IIYLYGGYLT 480
  481 LNGRMEPDAL LTYIFYHWRL HSALNAFSSL FSDVMKTIGS SRKVIHIMNR QPELDYEFGT 540
  541 ETPEIVGNII FEDVEFAYPT RKNANVLNKI NLSIDPGKTI ALVGPSGNGK STLVSLIQQF 600
  601 YTPQSGRILI DGTPIQNIDH LHYHTNIALV AQEPTLFSGT VRENILYGLE NGTDEDMMRV 660
  661 AEMANVHEFV SKMEKGYDTK CGEKGVQMSG GQKQRIAIAR ALIRDPRVLI LDEATSALDS 720
  721 ESEAMVQEAL NRCARERTVL VIAHRLSTVR SADRIAVIEK GNVTEMGNHE ELMKNTEGLY 780
  781 YKLVSKQLDP LIGTKKEEEK PPATEFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle