YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24307
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIVFRGTTS LSQFIDEGIS FFFLPKVPFN VTKGVVDQYY LHAFYALWNQ GMREDVQKFI  60
   61 LEKRHVKLWF FGHSLGGGLA SIASSYVAKT FKLHQSRTKL VTFGMPRIGD IDLAEAHDEL 120
  121 VPDSWRIEHR KDPIPSLPPR TFPKDQNRGS FHHTTEIWYP DGMARGARFE IGTRPDTTVG 180
  181 RSVFPFNFDD HKTYFNVAID DWWKNGFKFC HLAADKKFGH PIFIWGSCSN TPTKYENFLV 240
  241 FLSWCFYYLL LTHPPLLGFC TNTKMCTYTQ HFTYFAGFFP NFQSCLPTTI HMEIRCAPHN 300
  301 LIHSHLRRLL YANHNQITAI VMSHHVVRAV WHAVYAASAW PCCAPARKVV AVAAAMIIAD 360
  361 CVN

Type	Start	End	Confidence
Cytoplasmic	1	67	0.78
Transmembrane Helix	68	88	0.77
Non-Cytoplasmic	89	363	0.95