YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24027
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNLFARED PSESRNIFVL GICVLFGWMI VILICASPHL FRNYLKKWFK HDEDPLTDKI  60
   61 RKAEARLQET LRLAQKPSNF LVDQAAVMST MAVRPEKSEV EADPYNARIG RGGGRGRMYL 120
  121 KILSKNPQKV PIFSYQTETK NLSLSLSKKN FRTYTVPSPL FFLENRWIVS VSTSPPMRL

Type	Start	End	Confidence
Cytoplasmic	1	16	0.56
Transmembrane Helix	17	40	0.91
Non-Cytoplasmic	41	179	0.58