YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE23985
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTRFLRPS VSIFGFGIKS SMSSRAPPKA LLQDMVVPPR QLFGPGPSNM ADSIAETQSR  60
   61 NLLGHLHPEF VQIMADVRLG LQYVFKTDNK YTFAVSGTGH SGMECAMVNL LEPGDKFLVV 120
  121 EIGLWGQRAA DLANRMGIEV KKITAPQGQA VPVEDIRKAI ADYKPNLVFV CQGDSSTGVA 180
  181 QPLETIGDAC REHGALFLVD TVASLGGTPF AADDLKVDCV YSATQKVLNA PPGLAPISFS 240
  241 DRAMEKIRNR KQRVASFYFD AIELGNYWGC DGELKRYHHT APISTVYALR AALSAIAKEG 300
  301 IDESIQRHKD NAQVLYATLK KHGLEPFVVD EKLRLPCLTT VKVPEGVDWK DVAGKMMTNG 360
  361 TEIAGGLGAT VGKIWRIGTF GINSNSTKIE NVVELLSKSI GEKSK

Type	Start	End	Confidence
Signal Peptide	1	23	0.61
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	405	0.99