YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE23761
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFDRRHVSL SYFFLVFFLL FIFSGINFQS FLQLLHIFKM ASNSTNSKKQ NKSTEEPPSS  60
   61 VQKLLASLQQ AQNKSDLSEQ PSTSKPKKNE KRKKAVAQAP ASAPAPGPEE KKKQPKRASV 120
  121 GARMQQQAEN ARISQTKRPR QVSTSKGSSR NTTAPEQQNY QQQQQQYKGP RIPTDILDEL 180
  181 EFRFISNMVE CEINDNIRVC FHLELAHWYY IDHMVEDDKI SGCPNVGSRD FNFQMCQHCR 240
  241 VLRKYAHRAD EVLAKFREYK STVPTYGAIL VDPEMDHVVL VQSYFAKGKN WGFPKGKINQ 300
  301 AEPPRDAAIR ETFEETGFDF GIYSEKEKKF QRFINDGMVR LYLVKNVPKD FNFQPQTRKE 360
  361 IRFGFLD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.96
Transmembrane Helix	8	28	0.89
Non-Cytoplasmic	29	367	0.98