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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE23669
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFGNDPPDY VHLRSNESQM QLITISENSD IPTPSGSPCF NAPARDEAPS VIFIPGKKFQ  60
   61 GTFRWWKSRT TMEKLLLPVL LLFCLLTAVL LAVIINTDKR IEAMKTDHAT QTEHAGFGDP 120
  121 TENPTKTAED PRVPPIVPEA PTSPEPEVTT STEKPKEPEV CSTPGCVRAA THFLNAMNTS 180
  181 VDPCDDFFEF ACGQWNDQHP IPDDMYGFGT FAYAREQVRQ QLRVLLEQEV VTESESINMA 240
  241 RATYRSCMNK TQLDELMTGP LFETLTELGE WPLLQENWDK TKFNFTSLLV NSRRDYGVDV 300
  301 FFQLYIYADS KNTSRNTLFI DQSTLALGRG TRDYYLNTTL FSSHMTAYRK YLRQIAHLLK 360
  361 TDGNLTRSES EMNADIEKII DFEIELAKII VAEDERRNNT RLYNKRQIQD LYNLLPQVDW 420
  421 VPFFQSIAPS DLTHLFHNET EIIICEIEYL QHVSELIEKT DVGLLTNYVL WRVVQSNVRY 480
  481 LDERFEDIKQ DFLKVMTGQQ QSPPRWKDCA QVPSTVLPLA AGAIYVQAHF QESDKHEALR 540
  541 MIMHLRNSFA DLVRQNDWMD EETKAVAIEK ANSMINNIGY PDVTNDLPKL DKQYLGLSIS 600
  601 DSDTYYYIMK KSVVWMQSRE FQKLTKPFDK HEFDISPAVV NAFYSPEKNA ITFPAGILQP 660
  661 PFFSGTFPKA VNYGAIGAVI GHEITHGFDD QGSQYDKDGN LHNWWSESSL NSFDTRRRCI 720
  721 VEQYGNYTVP KTNFRVNGKL TQGENIADNG GVKEAFQAYQ KYVTENGEEP RLPGLQQYTN 780
  781 EQIFFVSYAH FWCGKKKEAA AMQQVLTDEH SPEVFRVIGV LSNMQAFADV YKCPRNAPVN 840
  841 PDHKCIVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle