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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE23612
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEGQSTSS NPPPVQYYNT FPDDDNLPPE YGPFDEVEPL IEAEQPMKIR TLVAAVGLTV  60
   61 LVFTLLISTV AFASLYFHLL MQNNARLPRW PGPSLSPLGK YSKAAVAADN EICSEIGRNI 120
  121 LLKGGNAVDS AIAALFCIGV MDTHSAGIGG GHFMTIYNAT TKECTVIDAR EIAPLAATEE 180
  181 MYRDKWNQSR IGWKAIAVPG ELHGLRTEFE RFGSGKVEWR QLLKPTIDLL AEGYPTSHAL 240
  241 AKALNQNEHQ IRAEPTMKNF INPETQRVFQ PGEQIKTRQN LLETFRLLAN STDPIADFYT 300
  301 GRLAEQLAKE FEANGGIIRL QDFKNYKSIV HDSKNVIYTK LKNGRGVCGP PPPSGSAVAQ 360
  361 AILNVMDGFE YNMKSFNEIA TLYHHFLESS KFSYAARSWL GDPQFVANAT EIAKNITSKE 420
  421 WADWVRSKIT DTTHPDDYYG GSFEAPPQDH GTTHVSIIDA DGNAVSVTST INLYLGALVS 480
  481 SESTGILWNN EMDDFSTPGH PNFFGFPPSP ANFIRPGKRP MSSQSPLVIF NTKGAELMAV 540
  541 GGAGGSTIIS GVAGVALHAL WLKADVKQAV DAPRMHNQLQ PNYTWYEPNF PKAYVKSLID 600
  601 RGHVMKAVNN LTVVTAAERL SDGQIYANSD FRKGEESAPA GY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle