YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE23313
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSTGFLVF LTALSHVDSL NVNTKLVLIW GSPNDTEISE TYSGSWDECL QKCYYDVTCV  60
   61 VIFRTSAGCK IYKIGTPFSV QKIIGAGGNI VGIKRTQEDC SETFSRPMFG QTTVTESFTS 120
  121 EKIVFNYTIS EIENDDLIEW KFDFKYFVQC DEESFASIRG DIAVCISIRT FFGPFCQNRA 180
  181 AGRFFFCVQK ETGLSLQAPM RTQKDTLLDA KNHDLMYFTS RIFCGFVALL NYLTKKSNSA 240
  241 LPPTRYSNMY FWIDGIRSSS AQYNMSDPTL NGITCFNWGP NSQEGVPNAS ALIEGTSIVR 300
  301 YWDCDATENG NSYCLRGAVC RIKPVSHT

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	328	0.99