YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE23251
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNGFALFSC LFFFLADCKK VNRDFDYELS KRTLEFAAAA YSIDPEPCIS KNNATLLFFK  60
   61 KVECDYMRDE CWSVIAADND TIFVSFSGTK SKEQLVTELI ESIGRPKHKL HNAGSVHYYF 120
  121 YSALKTMWSP MEKLLRGLKD SLPDHKIVFT GHSLGGAIAS IASTVFVRNF PETSSRTFSI 180
  181 TFGQPRVGNL EYAMTHDKLV AGGSWRLIHG RDIVAHIPFC VESYARWCIP FYNHGSYHHG 240
  241 VEVWFPGNMT SQDTFKVCTG TPLNEDNLCS NTHRYFDIND HLFYFGHHVS DYGVNGCVDP 300
  301 PDDEPLINNE NV

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	312	0.98