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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE22810
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNVISSSDF KRNFKIPMFS IANFAIFASF PVMNKISFQA PSDIEASDKN PNEPGADKLE  60
   61 SGNKNVSTSM MSNSSSRDDP EEDYIRSHLI NLHVYHGVLF GSEAEKLLTW DRAYLVRRAI 120
  121 TKPNKFLCIS VNWKNKIFHY QLDFNEDGWC CKKLYEKFPT MPNRRFLHIR QLLEAWSQAT 180
  181 PFLIPTPRGS NVLIHSTINL DKKLGCGAFG EVFKGQYKAV GSTNPPIEVA VKRILGNAKR 240
  241 KQIQEFCNEA QIMTVLQHEN IVAFYGFASL EEPIMVVMEL VTGGDLRKYF QTTQNIPKLQ 300
  301 ILWFAMNVAS GMRHLSSKGI IHRDLAARNC LVTQDLKAKI SDFGLSLQGT VTTKNLEKAP 360
  361 IRWLAPESLK SGLFNEKTDV WSYGVFLTEL MTRCEHDPLY PKSLKDAKAW ILTEERPHKM 420
  421 KNGDPKELMV LIDACCERNP NERLNFNTVK RQITDIYMEA LNKGPQDGRK PENSAMTVLT 480
  481 SKPSEDRTRI SLNRKKSVDR QKIPSSSKRS FFSSLRKKNK DQVTLPAGMS ISPSTNSAKP 540
  541 PSSETPNTGS SSPNAPTPPP QAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle