YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE22698
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLLLDPAI RTWVFLPIVV ITFFIGILRH YVSLLLMNKK KVELENIADG QYLLRARLLR  60
   61 ENGRFLPKTS FNARRQYLCA EETGYLSKAQ QRPAKGPNPM DPSQMTEMLK GNMMNMIPMI 120
  121 VVGGWINWTF SGFVTTRVPF PLTLKFKAML QRGVDLVSLD SAWVSSASWY FLCMFGLRSI 180
  181 YTLVLGSENA ADQSKAMEDQ MAMTGSAVNP QADPRAAFKG EWEALQMIQH QFAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.82
Transmembrane Helix	12	32	0.93
Cytoplasmic	33	113	0.90
Transmembrane Helix	114	134	0.86
Non-Cytoplasmic	135	165	0.78
Transmembrane Helix	166	185	0.73
Cytoplasmic	186	234	0.84