YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cutl-25
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLLSGQVIV AFHPTLVTPS DRAFRAHCEF EDFKRKTEIG IENLIQEHEL ILGNFQLPKI  60
   61 SMHILPAGEE SLTTKTQNFE ANEQKVLNVG DPIMFEWKLE QEHGIFGIQL ERCSAESENG 120
  121 KGMKILENGC SLDEELISDT TYSQDFSKIY ATSLAFKFPE EYEVFIRCAV RTCVKKTEHL 180
  181 EIINGEEEDL CSASNNCGFV SFESSQRSRR QLVGKNNNNT RTDIIYVNGR FRVEKQSSPQ 240
  241 EARATSQTEF CMPDVIYYLG LSTVVICYLI TISTTVVFKF GGRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	254	0.80
Transmembrane Helix	255	278	0.84
Cytoplasmic	279	284	0.64