YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE22466
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLPDVAMF SEIRQMNIRQ LFYQCLNFAM VVSSALMIWK GMMVITGSDS PVVVVLSGSM  60
   61 EPAFYRGDLL LLTNDLEDPV RVGDITVFKV EGREIPIVHR VIKVHEKSAD NTKILTKGDN 120
  121 NQVDDRGLYA PGQLWLSRTD VVGRTKGLLP YVGMVTIIMN DYPKLKYAVL AFLGLFVLLH 180
  181 KEN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	42	0.89
Non-Cytoplasmic	43	183	0.80