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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE22408
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPYRLKKA FLNLLLTISA AYFYTIRFVF WLVNTFFRER VYVTPPTDRL LLISATQAVQ  60
   61 MISQKEISST ALVESYIHRI EQVNNTINAV VVKLFESARE QANEVDSFIA LADEDDIKKK 120
  121 LEEKPLYGVP FTMKDALEVE NEIITCGVFN RKSTKCDRTA EAIKRLQAAG GILLAITNVP 180
  181 EVCMWVESVN TIYGRSKNPY DARRMTGGSS GGEGALLGSG GSVIGVGSDI GGSIRMPAFF 240
  241 NGVFGLKPTP GVIPLIGHVP EPTGYKTHML RIGPMCRFAE DLPLMLRIMA GENAQSLNLH 300
  301 EPVSGKKLRV FYMEGITGSP IIQPLEDEMR YALKKAVRFL ERKYDIVAQG IELPSAKHAM 360
  361 EFFTLSMHED TTDPAFNKLM LCTKGTKGEV NCFTEIFKYM AGNSNHTLSG IVAGIIDSRD 420
  421 PPFSEAHTKN LLYKRDRLKR QVKELLGTDG ILLFPSWPCT AMYHNEPILA PFNFCYTALW 480
  481 NVLSVPVVQC PLGLDSRGLP LGVQVIGNQY TDRNLIAIAQ VLEEGFNGWT PAGPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle