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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: rme-2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTMRLAWLL PLFIHILIKN TAQAPAVNNS TCDQAKEFDC GNGRLRCIPA EWQCDNVADC  60
   61 DNGRDESGCS YAHHCSTSFM LCKNGLCVAN EFKCDGEDDC RDGSDEQHCE YNILKSRFDG 120
  121 SNPSAPTTFV GHNGPECHPP RLRCRSGQCI QPDLVCDGHT DCSGGDDEVN CTRRGHENMQ 180
  181 SSTDFHDDVH LVDPTFFANE DNKCRSGYTM CHSGDVCIPD SFLCDGDLDC DDASDEKNCQ 240
  241 TNAPSEEEYL SGQADHMHSC SAAGMYSCGT KGSEIGVCIP MNATCNGIKE CPLGDDESKH 300
  301 CSECARKRCD HTCMNTPHGA RCICQEGYKL ADDGLTCEDE DECATHGHLC QHFCEDRLGS 360
  361 FACKCANGYE LETDGHSCKY ETTTTPEGYL FISLGGEVRQ MPLADFTDGS NYSPIQKFAG 420
  421 HGTIRSIDFM HRNNKMFMSI SDEHGDPTGE LSVSDNGLMR VLRENVIGVS NVAVDWIGGN 480
  481 VFFTQKSPSP SAGISICTMS GMFCRRVIEG KEQGQSYRGL VVHPMRGLII WIDSYQKYHR 540
  541 IMMANMDGSQ VRILLDNKLE VPSALAIDYI RHDVYFGDVE RQLIERVNID TKERRVVISN 600
  601 GVHHPYDMAY FNGFLYWADW GSESLKVQEM THHHSSPQVI HTFNRYPYGI AVNHSLYQTG 660
  661 PPSNPCLELE CPWLCVIVPK SDFIMTAKCV CPDGYTHSVT ENSCIPPVTI EDEENLEKLS 720
  721 HIGSALMAEY CEAGVACMNG GACRELQNEH GRAHRIVCDC EGPYDGQYCE RLNPEKFSAM 780
  781 EEEDSSLWLI VLLLIFLIIV AVVGIIAFLW FSQQEHMKDV ISTARVRVDN MARKAEDAAA 840
  841 PIVEKFRKVT DKQRSTPPRE GCQTATNVDF VSYETNAEKR IRMDSSPTSY GNPMYDEVPE 900
  901 SSTGFVRSAS APFAGVIRFE NDSLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle