YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE22318
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSATGHLRL ELTASSHFSL HLSTNSSLQT VELAMGASRT LSFHPKDHQE TLEIVFSKEF  60
   61 NFPLKYAFKM ETDDSSYQTF AFTDIVLLVK STFECDAGFN GKSCQEKTTS TTTTTSTTTE 120
  121 ITTTTTTVLI SEVPSTTPII KVAAFQQSNP SNIVLYSVLI LVIVTLLILV FIVFFLLKFP 180
  181 KKNVYIRPET PNLENCPVKI EDSRFFSPMS PRYTTEPHKL F

Type	Start	End	Confidence
Non-Cytoplasmic	1	153	0.88
Transmembrane Helix	154	177	0.94
Cytoplasmic	178	221	0.92