YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE22105
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIILLILIA ACVSSDATND SKNAVLGAST STQLASIMNS LHNLQGGGPN AQQTYTGAQY  60
   61 NRLVEKFKKE VDKADELEAE KRQLEAEMVS LKRNFDSQSA ELVKSQNQVL KLDLNVMRLE 120
  121 AKLTSSDANL DRAKDEVETA NRRQKRAEDD AKDARDELEK EKNANRANKA LVDELRNAAA 180
  181 QTTNEMRSLR NRLDECNNQR NGQTTTTTQD GYPFVSNQQN QPRASNTNQG LDRVDVIFVP 240
  241 NTNGDQGSIQ FGNGSPNNGR GGGQYVTPQH LLNLLQRH

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	278	0.99