YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE22016
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTFVVVSV LALASGTEAA ISGNYNCTTY NGTSFVYTPA AVACSNVISD ASCQVLYAAP  60
   61 DTLYPAAGND AERAYACYTT ATATPAATVS DMVTAAISTC PKTCGFCCAT SAYSCSNVAY 120
  121 PRLTCSSITA AQCASSVWRT IIAEDCPAAC GFCNDGGCVD SVVACANDIS ICTTVGLQDF 180
  181 VNTYCQKTCS RCASSTTTAS SSSSSCTSYT ADSSSACASW AANGFCTNTF YTAATRKSYC 240
  241 ATTCKLC

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	247	0.99