YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21798
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALIFIFLL TAPAFFCERV ELRSPRYTNF GNWHPWSRCR DGEFAYGIQV KVEGDQRGGD  60
   61 DTGLNAVCLF CRPLGSDEIS RENWINSGEG LWGVWGARKY CQNTNVLIGF ELRSEPDQRG 120
  121 KDDVAADNFA GYCGEPLGPR TKDVWVAGDT PGWGEWTGAQ LCPERYAVCG IQSQIEGDQR 180
  181 GGDDTALNNV NVECCKITVA ACNPGYSLVR IAHYDNSQSP GTVAHEVLRR ISITKTTGST 240
  241 TTLSNSEKNT VSGSIGASMA YTDGQFTGIV NTELTKSSEK MTTSQLQTMV QDAITNERSE 300
  301 KVTFTIPAWQ NIVIDQLVIT CGEYRIATAK TITRSIH

Type	Start	End	Confidence
Signal Peptide	1	17	0.95
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	337	0.99