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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11359779
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFGGGLGRF VGSATAPNLC REIIEVPGGA EWKIRNLQET APEFSWKYPG SSVIVNYHFK  60
   61 RLQNLDSPIF DENEKMFYGK VSHFMSPVEI SLQPKYLSTA RKSIMEQLNA TYQSTQVAEF 120
  121 QEDQIFVPVA CAVQELGIWY RGRIAQISGE AHVVVELIDF GTQILVPRHK VLPLTRRFGR 180
  181 APPLCLKCRV AGLSINDLEI KDLHDFKNII EECQALFRVE IKSVDEPHLI DLYHPTIAGR 240
  241 NVCQQFFRRP EDVAKLDRIE RSWETHCKKM NEEFDDDEDF EEEHGDGDYF PTSIQKPHLP 300
  301 EIPRQQYIKR LPKCQRAPRF EQDLLLIEHI ENSQLVYLQY PWQREKRQEL DKALHDAWHT 360
  361 LPSVPKDLRT ENQLVAISNR RLRGGMVCRG VICEDDTVLL VDYGRYVRCP TNGDFRLLPA 420
  421 HGLFMEEPMV TVISLVRGVN LHNPHHSETQ FLHQKLPRGA HVHFRWDKKS KTTPLRGKLI 480
  481 SNGACLNDQM FAKNRQFRAM KQRNFELLCS AMLGLGQLCI MVGYDSESFI LESVIHSIHE 540
  541 RTPEKVSPYA GYYGALDAEF SNFEIEQFEV KLAEIRWYRE KRKGTENAPM HQKCANYYYF 600
  601 FILKILNSQL HREIRKFTEN APMHQECAIV DIILILKLLI SLSQQWYREK RQVTENAPAH 660
  661 QKCAIVDMSK NVKILRQAVT FASFMTACLF APSILNLTTP KFLLVFAGIS YALFPMGFLF 720
  721 FNTYFYYFSG ALIGAGTAAF YLGMGSYLSA HSTRETIETN VSFSWSVSCF CLMIGAGILA 780
  781 TITSLSTPPT VPQTANSTWQ EEVRHERRYS DFEIKLLSAA FCGMASLGIL VKSCQIIKIL 840
  841 TLAQFRILGA ILDLLPELTC RTVISPKMMQ ILPLTILGGF NVSFWLSIFP TAMNFTKLNA 900
  901 HLTYIPAIYS LGAGLGEVLM GIVISMMSKR IKGFGLKPTM VLGALAVCIY CCLVHASTPF 960
  961 EAPMRPTSQP SLLISHSYPL IFIISFFCGM SDCCINSVRS VICALVMPSR RSQSFAVARM1020
 1021 YHAFACTICF FFSPMVPLYF YTLGLPSLSI FAIFVFFRVV DNTHVMERKI TEQKELNAAK1080
 1081 LEKLRQIAEA NKYCAEAPKM RQVTENAPMH QKSAKADVIL ILKLSASGVQ KF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle