YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21510
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAYQVPPLR PEGGPRGKEP QSWLEDYLEG KDEILLYITA ALGVLMPGFV YLLYRKCHAY  60
   61 YERYSKKKEE ERLAEELAES EAVVIVLGKE DGLAAPWAKV IHDKLCDEMV RKPMIWWSDS 120
  121 LDVKELMAFK GFCIFISETT AGGQPTPSTE WFLEWLEDLA ADSKLRKKAN FEKIRFSIVG 180
  181 FGSSDDGPAG FNKVARTLLK RMKILGARQI TEVELFNTTD TDKQTMERFV EFSFELLLQM 240
  241 DKHLPGMSGE DTEESEVGDD RSESSSDDNE VEEKHKKSK

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.88
Transmembrane Helix	34	54	0.63
Cytoplasmic	55	279	0.52