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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tat-4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPRPTHLH RRSSSKWVPP SAPLHNPISI FRGRSNRETG SRVIRPNHLF ESPRYELNNY  60
   61 RDFTDNRIST TKYTFWNFIP LNIWHQVSTK YANLYFIFIA ILNWVPFFDA YTRYVGLIPI 120
  121 CFVLGTTLIK DGIEDYRRYK FDNQINKKTC HVWDRDRCAF RKTEWRYILV GDFVHISNNQ 180
  181 DVPADIILLR SSSESGTCYI ETCNLDGETS LKQRMVPAKV IDYSKKDSTF KPPDFTGVVT 240
  241 CEKPDKSIYT IRAKVEFEPG QSDVIIKENM LLRGSRIKNT TFVEGIVVYA GHDTKVMQNN 300
  301 GRAPHKTSGI EKLTNKFIIA CFIMLLLMVL YGAITSAVWV GQHPVDEQIP FILSNTPRPF 360
  361 IEGFIGIGAF FINYQLLVPI SLYITVEIIK ALQIYFISND IQLYDQKSDR AIDCRSLSIP 420
  421 EELGTVTHVL SDKTGTLTEN MMIFRNCAFD ETDYGSNGSQ SNPDKPVKSD ELYQRILTSM 480
  481 QNPVQKHFFA NILLNNSVVV NHIPHTDVLE LGNFDGGVYN IGNSCFYDVT EEKYKQKLAA 540
  541 IGKGGVDDDD VSRPDELGLP TTSIQFDDRL TVIVEEDTPS DSPAPDASPR DLPETPTPTS 600
  601 PIYRPLSSLS SFSRKLSTVV RRSILRPISD IIPVRKRLIS FKQQAMNPYE AESPDELALI 660
  661 EGAALYDYVL LERAATSVTI STPEKAEKRY EILLTLPFDA TRKRMSVIVN SQKGPLMYCK 720
  721 GADSAIISRL SSDSLESKRV QDLKDHLDNY AKKGLRTLCF AMKYISKEDF EDFLDSYRFL 780
  781 MEDATSEREK MLSEKADELE TNLKLSGVTG IEDRLQDGVP DTLRALRDAG IQVWVLTGDK 840
  841 LETAQNIATS SGLFHPQRSL KVIETETDAE EASESAGLNI IMSPAAIRLA QDGNAHLMEA 900
  901 LKKAKTVLCY RMTPSEKATI VNTVKKRIKG NVLAIGDGAN DVPMIQAAHV GIGIAGKEGL 960
  961 QAAMACDFAI ARFKFLSRLL LVHGHWSYYR LANTFLYFLY KNANAVFIIF YYQFYNGASG1020
 1021 TNIVDPIWGV IYPIIFTSVQ PVVVGVLDQD YDDQTLMNKP ELYVIGRENQ LYTWKHFFRD1080
 1081 VIDGIYQAAV IYYVAYLTLD NSTSSLWEMG FYIATSSILV NSGHLALQVR YWHWQLVALF1140
 1141 SFFILFNFAF FFAECLTAAA AMVPDPPVWM PIHAMGDPRF WYYQFITVIV ALCPRFTSMC1200
 1201 LMSSLKSETS KR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle