YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21178
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFSLEESA VKILGVTIAV IGAIYLIYPP GLLLIPLSLF IFSYTTKNEK CSSKNVDTFF  60
   61 SGFKIGGHRG APKSFPENSM AGFAQAKADG ADLIEFDVAL TKDGKAVLMH DDDLDRTTDM 120
  121 KGPIRDKTRA ELDRCDISAT FKRTAPGDHC RLATVSRERV PDMEDVVKWA VENNTRMLFD 180
  181 VKDSDNELVD QIANLFQKYN LYDKAIVCSF FPWVVYRIKK GDQKILTGLT WRLKFWSYHD 240
  241 IENIRPRYSG PKQMLFEMID VAHVWLLKKV TPWYLGADLL LTNNLDISQA LIMDQRRRGM 300
  301 RVAVWTVNDM AEMHWMLKTL NIPILTDYPE LTTQAAHLEE LQKRDYMPMH KSSSDL

Type	Start	End	Confidence
Cytoplasmic	1	10	0.90
Transmembrane Helix	11	33	0.86
Non-Cytoplasmic	34	356	0.96