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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE21162
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAYTYGSF PQMGHPPPKE TKKGCQVKSF VLPVFCTLLG VLITAFITWH ITKSQYSRND  60
   61 PHDEIESENV PAAKPEDNIS ASELRLPTSV SPISYQLTVK TYLPGYGYTA DKNNLTFEGQ 120
  121 VLIELNITKS IKKVSLNSKD LNYTEEFIKK SSILVNGKSI AFTLDDKQST HEKIFFNLDE 180
  181 TVEPTTSATL KVAFGAPLRT DMSGLYQTTY TNSKGESKMA AVTQMEPVYA RRMVPCFDEP 240
  241 AYKATWTVTV IHPNKTVAVS NGIEDKVEDG QPGFIISTFK PTPRMSSYLL AIFISEFEYN 300
  301 EATTKSGVRF RVWSRPEEKN STMYAVEAGV KCLEYYEKYY NISFPLPKQD MVALPDFSAG 360
  361 AMENWGLITY RESALLYDPR IYSGSQKRRV AVVIAHELAH QWFGNLVTLK WWNDLWLNEG 420
  421 FATLVEYLGT DEISDGNMRM REWFTMDALW SALAADSVAS THPLTFKIDK AMEVLDSFDS 480
  481 VTYDKGGAVL AMVRKTIGEE NFNTGINHYL TRHQFDNADA GNLLTALGEK IPDSVMGPKG 540
  541 VKLNISEFMD PWTKQLGYPL LNASRINNTH IIVEQSRFKL LATGKEEEKY SNPVWGFKWD 600
  601 VPVWYQVVGS SELEMKWMKR NEPLIIKSDK NVIINAESNG FYRAGYSSGL WKEISEMLKE 660
  661 NHEQFSPQTR VRLIDDSFAL ARAGLLSYSI PLNLITYLKN EKEYLPWSGA IAKIRELIDM 720
  721 YGSNPEKDIV NKFMIALAEN APARRSIDFV SKNYLDEKKF YEVGAAQQII LNSCGFGDSV 780
  781 CQADMVKMFT EEVLAKCDAT RILSECSQIP APFRAESYCE AVRNGNSDTF EKVFHWYKTE 840
  841 RNQVEKLNLM TALTCSKDIL TLKKLLLDAM KPEGSSFRLQ DCAALFAKIS SNDATTDAML 900
  901 NFLIDRWEDM QKRLATDHSG FSRVLSSIVN TLKTRGGLDQ LRKFRKKAPK ASEFGLDKME 960
  961 ESAEVTVTWR ETNLKFVTKI IEEISKSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle