YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21161
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVASVEVTC FHVILGFLMF LLYLLLHQIY YQIKLRRERK VPNTLHQFEN IPGLHTIRTP  60
   61 SHTFFCGAQN YRQSSKNPQI YSQDRLKVQR LLRKLLENPQ IHVPENTVAV CIPTWCSVTG 120
  121 ARFHEFQCTP PAPYCPCPTI LSEFHYTYKM VSARVQATFY HNRRCTCLAG ICIYLRIPNE 180
  181 PWYFGDLPDE LIFDLIGPGV KRFISPRGRR RHSPLLLPPV PSAPEMTSSS EEELEPDDVA 240
  241 TPEDPPAYAT VFGYTRTDLI SRIDEIPPPN YYSLFVNSSK L

Type	Start	End	Confidence
Cytoplasmic	1	7	0.53
Transmembrane Helix	8	31	0.88
Non-Cytoplasmic	32	281	0.56