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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7507073
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSSTRTDT RALTVRCCTR AARVRLEEKY SRAQHSTLTD THTDTDTKRM RRAQKDHTHT  60
   61 HTYIFTHKRL TLSKPHSFAS LSFFHFLSLS NMHSTPFSHI IPLAINGHSL YNFDFCLCIS 120
  121 LTFFIFRRGA NMSISTIRRQ VKNVAYNFSD AQVKVREATS NDPWGPSTAL MSEIADLTHN 180
  181 PMAFTEIMSI VWKRLNDSGK NWRHVYKSLV LLDFLIKCGH EKVAQQCREN VFTIETLKDF 240
  241 QHVEDNRDQG LNIREKAKQI TSLLSDDERL KNERTRFILT RNKFKQNNPG PVGAESRRSN 300
  301 RHHVTDASLD PEYEDARPST ATEEEMQLQI ALALSREECE KADEMRKSDD ARLQMALEES 360
  361 QKLQDADRLA TTKQGTVSSG QLTQSALDDL LSLGVGELVS GNNDQPSSSS AWGMNDPWGA 420
  421 PQASASLNTN DQMFANSMSN NDPWATSTVA QPVAATAPNS DPFASWDAPA PAATTPSTMP 480
  481 TSSSFDLLGG DLLSPTNSLS ANINTNNSTN GTRKTPENFL GENSNLVNLD NLLGSGTPST 540
  541 TGGNPFLTGA APANANPFAA QQRKSPTLNE MRAAQGQAPP IPSMAPRGTL PQANPFANPF 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle