YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21116
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYRLAVQRF FDHFSTSSMI LNILLLFFPV VSAEFDFKDL KWQPDLITKE SILQNNGKLT  60
   61 VEPLFEGMTQ LAFVTPWNPR GFMLARKRAA RLTYISPVWF RVHPLFDTDQ ELSDVGIYGK 120
  121 KDINPDFIRA LRKSNPDIKI VPRFYFDEFK SAILKEFVVK EALAQKVGQT LANFCHKHGF 180
  181 DGLVIDLYST FVDVIANSEF RLDALETIEH IGKVIRKNEL TAILSFPAVV NVIEEENGSP 240
  241 KSVFFISSEE CSGLVAAYYH LQLWTYTDAL KGSRKYVNDE FIYHNLHHCG FSPKLMIGIN 300
  301 FYGIELNLKG ATTITAKRFL QVLKGEDSVF KFNEESKEHM LLFERNKSTI IFPTLTTLEH 360
  361 RIALAKKFNA SISIWDYGPG LDYFTNLV

Type	Start	End	Confidence
Signal Peptide	1	33	0.75
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	388	0.98