YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21093
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRFSGKVA LVTGSSNGIG RAAAVLFAKD GAKVTVTGRN AERLEETRQE ILKSGVPESH  60
   61 VLSVATDLAA EKGQDELVNS TIQKFGRLDI LVNNAGAAFN DDQGRVGVDQ DVSVYDKIMQ 120
  121 INMRSVVTLT QKAKEHLVKA KGEIVNVSSI AGTAHAQPGV MYYAMSKSAL DQFTRCAAID 180
  181 LIQYGVRVNS VSPGGVTTGF GEAMGMPSGA FEEMMKFMES RKECIPSGAV AKPIDIANII 240
  241 AFLADRKLSS YIIGQSIVAD GGSTLVLGMN AHNWADLMKQ S

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	281	0.97