YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE21043
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVSRRIPVL AYLFLSCLIA LYAFKFHLST LVDGIIFNNE DDPTPFDFAL SFQLKPELPD  60
   61 ELPAPNVLVL VTTIASEFEM RNQVRKSWAN YTSNAVRVKF LMGIPHNFAN AADIPRGNFS 120
  121 IVNQYYPDTK CLVKADVDNV LILRNYERLC EEAVAPLILG KCDVSRTVLR NTTKWAVPEF 180
  181 VYSEPVYPTY CSTGTYVLAG KTVPQSLIKE AMSSPFANSL NFRKLSEDVI FTGILAEKAG 240
  241 IKRRHINGLS FFEIPEFFCR NGFKTTYSTH LLSDKNPVKN FYKLMKIEGV LCRWWDPYAV 300
  301 RRWRS

Type	Start	End	Confidence
Signal Peptide	1	23	0.83
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	305	0.99