YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	scl-13
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFALCLLAI FGCATAQFSS TAQGQIVDAH NKLRSAIAQG SYVAAGTQEP SASNMRKIVW  60
   61 DETVAAAAQE YAEGCPDDHS GTSYGENLYW SWSSSAPSSL DKFGVAASNS WESEFQKYGW 120
  121 TSTFLDEAGF ATGIGHATQM AWAETSKIGC GIKNCGKDAN KKNMYKVAVV CQYDSAGNMM 180
  181 DSDIYQQGET CSACSEDASC EQDSGLCA

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	208	0.99