YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20889
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGSVRVLVL LLAFIVTASA IGYSGGGYQP HSCDGDWPEK FPEAPKGFQF RCKCPCKCPP  60
   61 KSPTTTSIST STVSTTPERL TKPYEETDTP IPTHSSPSTS TSTSTSTSTS TSTSRSTSTV 120
  121 TPTTRSSTTT TATSTPTSSS KATTTSAQIT QPEIPQAAPG TVLKGEEFPV KQDGLGDGGV 180
  181 VHGPGTTFWI RSPTPPNIPL LVGGQSRLAT VRPDSPYASD AALNPLNGGA GDMEFGIKNV 240
  241 GTPKTPRAVI NPDA

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	254	0.99