YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20725
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARFSGKVAL ITGSSNGIGR AAAILFAQQG AKVTITGRNA ERLKETRHEI KKSGIPAENI  60
   61 LAIVADVITD EGQMRLINDT VRKFGHLDIL VNNAGGALMD AQGRVGMDQD ISVFDNTMQI 120
  121 NMRSVVTLVQ KAKEHLIKSK GEIINVSAMA AGHHGDPIAT FYGMSKAALD QFTRSSAISL 180
  181 IQHGVRVNSV SPGFTKTGFG EAMGFPPIAM KKVISFYESH KECAPSGAIA QPGDIAQVIL 240
  241 FLADRTMSSY IIGQSIIADG GSSLVMGMHA HDMLDILKA

Type	Start	End	Confidence
Signal Peptide	1	21	0.76
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	279	0.96