YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20695
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSKATDYV VPEEFRGDAW LKFSSWINSI SAYLYLTDFI ISFIGIFPSL FHFWILTRTY  60
   61 MRHLTTNLFL IGITVCGIIH IICNIIEFFP MLYDYYLSFK VPSECFPFAP YSKIVSNYYS 120
  121 SMTNAVVTGM LTYFTVAMAI IRFLVVKFPL ASGMQRLIYS KSGLKILLPI IILILPLWIA 180
  181 EISSTNIVET GIWVPGPNCD GFAENYTEKM YTVETSITFG IDEFYWIVYY IYAVIFQFIP 240
  241 SILLPISTVL LIIELKKNKK TTTWTSKRQF SGKSTNCRN

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.94
Transmembrane Helix	34	56	0.92
Cytoplasmic	57	65	0.87
Transmembrane Helix	66	89	0.88
Non-Cytoplasmic	90	124	0.95
Transmembrane Helix	125	146	0.92
Cytoplasmic	147	162	0.91
Transmembrane Helix	163	184	0.86
Non-Cytoplasmic	185	228	0.95
Transmembrane Helix	229	252	0.91
Cytoplasmic	253	279	0.97