YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE20475
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGFIEIAN KQGLTATLLP FGATLAKLTF PDKNGKNQDL VLGFDTIDEF EKDAASIGKT  60
   61 VGRVANRIKN STLHFDGKQY TMTPNNGPHY LHGGPNGLGY RKWEVVRHAP ESVSFSVRAN 120
  121 EQDDGLPGDA KIDVTYTVND RNQLIIEHHA TCDTPGLLAL TNHAYWNLDG SDTVAEHFLE 180
  181 MEADEFVEVD DTFCPTGAIR SVTDTGFDFR SGKQLKESGK DAEELLDLDN DLVITKKTPP 240
  241 STPSTYLRFW SEKSGIELSI TTSYPVIHLY ASKFLDCKGK KGEHYKANKA LAIEPQFHSA 300
  301 APNFDHFPDV SLRPGDHYCQ EIVYTFSHVN

Type	Start	End	Confidence
Signal Peptide	1	26	0.68
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	330	0.99