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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: osm-9
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGSSRNKT EPRGEGVKLA FDPDEKWSNL YREREKNHLY KWVAVRKGGE LINIYERDGE  60
   61 EGVLKFAEEK LLTILYDEGQ NPKLVTYSDY IKWKKGVNVQ LGLSEESVDM QQSRFKEHYA 120
  121 LWKLNKRGVE GENLIHLLLN REQQVCYEIA RILLKRFPGM ANDIYLGDEQ FGQSALHLAI 180
  181 VHDDYETVSL LLNSKADVNA RACGNFFLPE DFKLTNKITD YQGYAYYGEY PLAFAACFGN 240
  241 KDIYDLLIQF GANPNLQDSF GNTILHMCVI NYSSSMYSYA VRHWAKPADP HVVNHAGFTP 300
  301 LTLATKLGRK QIFEEMLEIM KVEFWRFSDM TCSAYPLNTL DTIQPDGSTN YDSALMTVIN 360
  361 GSTPEHLDMI GSEVIQRLLA DKWKAFAQRK LIERLVLLIV QLITLSIVVY IRPTELPRLY 420
  421 MEDPQWDDYI RTACELLTIL NCIFFVGYQQ LGEIRTQGMR GYLRNLKTAP AKAVFCIANL 480
  481 FLLLCIPFRL MKKHEIEEAL FVFALPGSWI FLLFFARSAK LTGPFVQMIY SMIAGDMIRF 540
  541 AIISAIFLVS FSQVFYFVGK DMDAKQKLED TNPHACRISG YTIYTYNTFP ETFITLFRAS 600
  601 MGGYDYEEFS CANYQALTKT LFVLYMFVMP IMMINILIAM MGNTYTTVIA QAEKAWRQQY 660
  661 AQIVMVLERS VGKERLAASQ LEYSIRLDQE GSSGMEVRGL MVIKQTKKTR ARQRKQAIYN 720
  721 WKTIGRKVIH TIDKVGTEQA VLLLHGHDRL DRVYEDHVQP EKVPSRSRTP TRIGTTLNSS 780
  781 KRLKTTTMVV GAAVTNTHEV RTDEAVNSML LSAPPSLSGE GATMDWQPSI TPVEERSESK 840
  841 SQEDRSEAST PNLGIHRTTP KADSPIRVVE YSRTIRVRAA DTIPSIELPN IPTKQTSSTP 900
  901 PHRAVSPRLR ADMFRRHQQP ASFDQSPPLP PTNDKSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle