YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|139472553, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVNRWLFSTN HKDIGTLYLL FGAWAGMVGT ALSILIRAEL GQPGALLGDD QIYNVIVTAH  60
   61 AFVMIFFMVM PMMIGGFGNW LVPLMIGAPD MAFPRMNNMS FWLLPPSFLL LLASSMVEAG 120
  121 AGTGWTVYPP LAGNLAHAGA SVDLTIFSLH LAGVSSILGA INFITTIINM KPPAMTQYQT 180
  181 PLFVWSVLIT AVLLLLSLPV LAAGITMLLT DRNLNTTFFD PAGGGDPILY QHLF

Type	Start	End	Confidence
Cytoplasmic	1	13	0.97
Transmembrane Helix	14	36	0.91
Non-Cytoplasmic	37	58	0.85
Transmembrane Helix	59	82	0.90
Cytoplasmic	83	100	0.86
Transmembrane Helix	101	122	0.91
Non-Cytoplasmic	123	145	0.83
Transmembrane Helix	146	168	0.90
Cytoplasmic	169	181	0.89
Transmembrane Helix	182	205	0.91
Non-Cytoplasmic	206	234	0.90