YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE20255
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPDSACPL LYEFVISPFA LEECRQGTSS EPGRMRPFSD AVTASASTTS TTAVATTVTS  60
   61 EQRQQSCCSA RPLAIGVVAV SMSFALIYFF MIVPLTSSIL PSQSSPILPS DISTIYQKSS 120
  121 TDFPIFTNST ELITTTEDPL YVHINNTNHR LQIPQIHIPL LYEVELKLFV PWRPTISFGS 180
  181 DNFSVKGHVR VHFTSGGGSR ILLHSDSKQH IGDCVVRDEL NRNITVKLVG RQYSQILDLN 240
  241 LETDMIHGMN YTLDVAFKSA INLNLAYGLF AAPYTFENET RYVVATQLQI SEARTVFPCI 300
  301 DVPDMKAQFD TVIIHPTGTT SIANMMENST KVDGEWTTTT FHRTPPMSTY LFAFSVSDYP 360
  361 YLETFSGRGV RSRVYCDPTK LVDAQLITKS IGPVLDFYED YFGIPYPLEK LDVVIVPALS 420
  421 VTAMENWGLI TIRQTNGLYT EGRFAISQKH DVQEIVAHEL AHQWFGNLVT MKWWNDLWLN 480
  481 EGFATLISVR AVDFLENTTW RYEDSSAESQ CVALRADQID SISPVSGKKN SNFDSYMEIQ 540
  541 GKAIIYKKSA IIIRMIERLV EEDIFRQGLK RFLNTFLYKN ADHEDLFNVL VYVHDSSAGG 600
  601 HLRGQNFSLS DVMDTWIRQA HFPVIHVNRK EGSLVTLRQE KYEHVPRDEP EKQVWKIPIF 660
  661 YDDPVSGKHK VFWLTDTQPK VFDMGGLLVV DPHQLTYMRL RYDMEMYSDI TMALMDDFTM 720
  721 IPTNSRSRLI DDTLAMAENG QLTYKVPFNL TMYMSREIAY RPFQTFSAYL DFFLPRMYIH 780
  781 EGWSIYKKYL ELVVGIPFDK FNAEGLDVSF DHNTDLFHTR QIVVFRACGI EYEPCVRMAK 840
  841 QRFAELRVNC SGENQLLSGM ECNKIPYYLR PHVYSAAIND GTQEDFDFLY KKWMIEHYMM 900
  901 EHDNIFTGLC TTNIRENSDR AWRQVIKNGA RENVMVRAQL CSKKLSKNNF ILDLLYEDKV 960
  961 YLKEFVDKDR KSLFALQQLL YRKINYEEEV LKADEVFKPY PQLRWIPKLR AIASDRLDWR1020
 1021 KTVAAQFTGN ASEAIEEMRK FQITI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle