YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-71
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICASKITML GLLVMCTLGG VLGKVDIRQT TANKAFMETM RADGYEVVHP FQIRDKNERI  60
   61 GIDTRNYFLK AQEHYSHVTI VIRSNQLGRL KLVLERNNFI FLNQTAFHKL DADGERVIQN 120
  121 RVENCYYQGT VGGEESSFVA LSSCNGLRGV ISFANGTTFG IWPLDGGDRN SRRHPHILYK 180
  181 SEWSQEAKCG SSMAHAVGQR RMKKHVHKHR SHHHEHNKKR DVSKRTKYVE VALIADYEFM 240
  241 KARGLHDLDA ISYMLESLNI ADSMLSRDLN IRLSAVYVEL WTDVQRIDLW EDIERTLSGV 300
  301 VDYASGHIYH IQKDASILFT AGSFANQEVS NAAIRSICTA RSAVIVKGVE QFATHWNGEL 360
  361 LAQSIGHLLG LEHDTTACSC EPSPECVMRQ QPGRVGGGGG SPFSWQFSKC SVARMHGIWQ 420
  421 DGNIQCLLNK PFQVSELREC GNGVVDGSEE CDCGSRENCQ DPCCDPLTCT LRPHAQCAAH 480
  481 HKCCHRCELR KAGDTCRSSK SPCDVAEQCD GKSGDCPPDG HLIDGTVCGT DGQCWRGNCS 540
  541 DSHQQCQKLW GREARVAEPV CFEQNTKGAE YANCGQRQAD GTYHPCQIED TRCGTLHCHS 600
  601 GSITPIDSSL KAFTFHFTEN SHQIQCKSIA SAAVGLTSDG TNCASGRVCV AGSCVEMSSV 660
  661 SSATACPTNN LALLCSGHGH CTTTARCVCF NGWSGVACDI RSNSSTYQGS MGFGEEGSGG 720
  721 SSQKSSERKT IMIPHLNIGT TLETATLFAI LLGFGVFLLL CLVCLMLCYR RRSVVEIPKP 780
  781 SDEKDEESPD RQIKFGNMPS YREEKRKRKS NKKIYGALNR ITEADERDST SLRSRDSAGG 840
  841 SQQLVDRRNG APVVVGGIRD PYAGEHIYAE SSSNHLTRQF RGINSDGSYP LRSFGSWRSS 900
  901 APISPASSSG QLTDVSTATT PLRLNKIGKF LKTLQSDDES PSPFSDHQSF TTGIGIGARL 960
  961 EQMQFGGGGD EELSAVEADH DVGSNTESSR GCEEPMDPGS WDSPTLVNGA SSSSTSNNYN1020
 1021 FRQSPSLFSD PFKLEMTNSM HN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle